If the platforms at shipley could be extended over the bridge then they could easily be doubled in length to around 200m.
The Issue at Shipley is in particular platform 2, the length of which is limited by the junctions for the two sides of the triangle heading towards Bradford. It
could be solved but would be ridiculously expensive.
Hopefully the harrogate line will be electrified within the next 8-10 years so the 333s can go there and operate a loop-like diagram going Leeds to York via Harrogate and back via Garforth and vice versa. Then with platform lengthening to allow 6-car trains on the Airedale & Wharfedale lines a new fleet of 3 car emus can be ordered to operate from leeds on most electric services including to doncaster, huddersfield, hull, selby, skipton, bradford and ilkley.
One advantage of running the Harrogate services as a Leeds-Leeds loop would possibly be to make more use of the two North/East facing bays at Leeds. This would also prevent the problems of running a 'true' circular service. There would still be a requirement for some to turn back at Knaresborough though, unless the line was doubled from there to York.
To get vaguely back on topic, by the end of CP6 with the knitting all strung up, I could possibly see the 333s being used on Leeds-Doncaster and Leeds-Sheffield via Wakefield Westgate/Rotherham (assuming Sheffield-Moorthorpe junction is done as an add-on) given that Travel South Yorkshire helped keep the 4th cars.
That wouldn't use all 16 though, so I'd expect them to continue on some Airedale/Wharfedale diagrams along with stoppers to Huddersfield/Selby and the Harrogate line assuming that gets wired too. the 321/322s may be sent to join their cousins down south, or more likely stay to work the same diagrams as the 333s (even possibly along with a few extra 321s if they become available).
As for any 3-car units that might be needed to allow 6-car formations, a new order might be the best way forward. There aren't many options from existing stock without shortening some 317/319/321s (with additional work being required at least in the case of 319s and presumably the others too). I mentioned earlier that it'd be nice for the 323s to come 'home' but that's really just romanticism- in reality both Birmingham and Manchester will be fighting over them. Just a shame there weren't more of them built!